>>> Building on localhost under math/py-netcdf4 BDEPENDS = [devel/py-build;archivers/snappy;math/py-numpy;devel/py-setuptools_scm;devel/py-wheel;lang/python/3;lang/pythran;archivers/libzip;math/netcdf;lang/cython;archivers/blosc;math/py-oldest-supported-numpy;math/hdf5;devel/py-setuptools;devel/py-installer] DIST = [math/py-netcdf4:netcdf4-1.7.2.tar.gz] FULLPKGNAME = py3-netcdf4-1.7.2p2 RDEPENDS = [math/hdf5;lang/python/3;devel/py-certifi;math/py-cftime;lang/cython;math/py-numpy] (Junk lock obtained for localhost at 1753359137.40) >>> Running depends in math/py-netcdf4 at 1753359137.48 last junk was in x11/mate/calc /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6p0 hdf5-1.14.4.3p0 libzip-1.8.0p0 netcdf-4.9.2p5 py3-build-1.2.2.post1p1 py3-cython-3.0.12p0v0 py3-installer-0.7.0p2 py3-numpy-2.2.6p1 py3-oldest-supported-numpy-2022.8.16p3 py3-setuptools-79.0.1v0 py3-setuptools_scm-8.3.1p0 py3-wheel-0.46.1 python-3.12.11 pythran-0.15.0p5 snappy-1.1.10p2 was: /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6p0 hdf5-1.14.4.3p0 libzip-1.8.0p0 netcdf-4.9.2p5 py3-build-1.2.2.post1p1 py3-cython-3.0.12p0v0 py3-installer-0.7.0p2 py3-numpy-2.2.6p1 py3-oldest-supported-numpy-2022.8.16p3 py3-setuptools-79.0.1v0 py3-setuptools_scm-8.3.1p0 py3-wheel-0.46.1 python-3.12.11 pythran-0.15.0p5 snappy-1.1.10p2 /usr/sbin/pkg_add -aI -Drepair blosc-1.21.6p0 hdf5-1.14.4.3p0 libzip-1.8.0p0 netcdf-4.9.2p5 py3-build-1.2.2.post1p1 py3-cython-3.0.12p0v0 py3-installer-0.7.0p2 py3-numpy-2.2.6p1 py3-oldest-supported-numpy-2022.8.16p3 py3-setuptools-79.0.1v0 py3-setuptools_scm-8.3.1p0 py3-wheel-0.46.1 python-3.12.11 pythran-0.15.0p5 snappy-1.1.10p2 >>> Running show-prepare-results in math/py-netcdf4 at 1753359185.02 ===> math/py-netcdf4 ===> Building from scratch py3-netcdf4-1.7.2p2 ===> py3-netcdf4-1.7.2p2 depends on: blosc-* -> blosc-1.21.6p0 ===> py3-netcdf4-1.7.2p2 depends on: libzip-* -> libzip-1.8.0p0 ===> py3-netcdf4-1.7.2p2 depends on: snappy-* -> snappy-1.1.10p2 ===> py3-netcdf4-1.7.2p2 depends on: py3-cython-* -> py3-cython-3.0.12p0v0 ===> py3-netcdf4-1.7.2p2 depends on: hdf5-* -> hdf5-1.14.4.3p0 ===> py3-netcdf4-1.7.2p2 depends on: netcdf-* -> netcdf-4.9.2p5 ===> py3-netcdf4-1.7.2p2 depends on: py3-oldest-supported-numpy-* -> py3-oldest-supported-numpy-2022.8.16p3 ===> py3-netcdf4-1.7.2p2 depends on: py3-numpy-* -> py3-numpy-2.2.6p1 ===> py3-netcdf4-1.7.2p2 depends on: python->=3.12,<3.13 -> python-3.12.11 ===> py3-netcdf4-1.7.2p2 depends on: py3-build-* -> py3-build-1.2.2.post1p1 ===> py3-netcdf4-1.7.2p2 depends on: py3-installer-* -> py3-installer-0.7.0p2 ===> py3-netcdf4-1.7.2p2 depends on: py3-setuptools->=79v0 -> py3-setuptools-79.0.1v0 ===> py3-netcdf4-1.7.2p2 depends on: py3-wheel-* -> py3-wheel-0.46.1 ===> py3-netcdf4-1.7.2p2 depends on: py3-setuptools_scm-* -> py3-setuptools_scm-8.3.1p0 ===> py3-netcdf4-1.7.2p2 depends on: pythran-* -> pythran-0.15.0p5 ===> Verifying specs: netcdf ===> found netcdf.10.0 blosc-1.21.6p0 hdf5-1.14.4.3p0 libzip-1.8.0p0 netcdf-4.9.2p5 py3-build-1.2.2.post1p1 py3-cython-3.0.12p0v0 py3-installer-0.7.0p2 py3-numpy-2.2.6p1 py3-oldest-supported-numpy-2022.8.16p3 py3-setuptools-79.0.1v0 py3-setuptools_scm-8.3.1p0 py3-wheel-0.46.1 python-3.12.11 pythran-0.15.0p5 snappy-1.1.10p2 Still tainted: host marked nojunk by devel/pygame >>> Running junk in math/py-netcdf4 at 1753359217.50 Can't run junk because of lock on devel/pygame (Junk lock released for localhost at 1753359225.09) distfiles size=835064 >>> Running extract in math/py-netcdf4 at 1753359225.17 ===> math/py-netcdf4 ===> Checking files for py3-netcdf4-1.7.2p2 `/ports/distfiles/netcdf4-1.7.2.tar.gz' is up to date. >> (SHA256) all files: OK ===> Extracting for py3-netcdf4-1.7.2p2 >>> Running patch in math/py-netcdf4 at 1753359228.49 ===> math/py-netcdf4 ===> Patching for py3-netcdf4-1.7.2p2 ===> Applying OpenBSD patch patch-pyproject_toml Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |Index: pyproject.toml |--- pyproject.toml.orig |+++ pyproject.toml -------------------------- Patching file pyproject.toml using Plan A... Hunk #1 succeeded at 2. done ===> Compiler link: clang -> /usr/bin/clang ===> Compiler link: clang++ -> /usr/bin/clang++ ===> Compiler link: cc -> /usr/bin/cc ===> Compiler link: c++ -> /usr/bin/c++ >>> Running configure in math/py-netcdf4 at 1753359229.77 ===> math/py-netcdf4 ===> Generating configure for py3-netcdf4-1.7.2p2 ===> Configuring for py3-netcdf4-1.7.2p2 >>> Running build in math/py-netcdf4 at 1753359231.08 ===> math/py-netcdf4 ===> Building for py3-netcdf4-1.7.2p2 * Getting build dependencies for wheel... -L/usr/local/lib -lnetcdf Package hdf5 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5' not found /usr/local/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/local/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/local/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() reading from setup.cfg... using nc-config... checking /usr/local/include... HDF5 library version: 1.14.4-3 headers found in /usr/local/include using netcdf library version b'4.9.2' using Cython to compile netCDF4.pyx... netcdf lib does not have parallel functions NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed running egg_info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'examples/data' warning: no previously-included files found matching 'src/netCDF4/_netCDF4.c' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' * Building wheel... -L/usr/local/lib -lnetcdf Package hdf5 was not found in the pkg-config search path. Perhaps you should add the directory containing `hdf5.pc' to the PKG_CONFIG_PATH environment variable Package 'hdf5' not found /usr/local/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:82: SetuptoolsDeprecationWarning: `project.license` as a TOML table is deprecated !! ******************************************************************************** Please use a simple string containing a SPDX expression for `project.license`. You can also use `project.license-files`. (Both options available on setuptools>=77.0.0). By 2026-Feb-18, you need to update your project and remove deprecated calls or your builds will no longer be supported. See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! corresp(dist, value, root_dir) /usr/local/lib/python3.12/site-packages/setuptools/config/_apply_pyprojecttoml.py:61: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! dist._finalize_license_expression() /usr/local/lib/python3.12/site-packages/setuptools/dist.py:759: SetuptoolsDeprecationWarning: License classifiers are deprecated. !! ******************************************************************************** Please consider removing the following classifiers in favor of a SPDX license expression: License :: OSI Approved :: MIT License See https://packaging.python.org/en/latest/guides/writing-pyproject-toml/#license for details. ******************************************************************************** !! self._finalize_license_expression() reading from setup.cfg... using nc-config... checking /usr/local/include... HDF5 library version: 1.14.4-3 headers found in /usr/local/include using netcdf library version b'4.9.2' using Cython to compile netCDF4.pyx... netcdf lib does not have parallel functions NETCDF_PLUGIN_DIR not set, no netcdf compression plugins installed running bdist_wheel running build running build_py creating build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 copying src/netCDF4/__init__.py -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 copying src/netCDF4/utils.py -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 running egg_info writing src/netCDF4.egg-info/PKG-INFO writing dependency_links to src/netCDF4.egg-info/dependency_links.txt writing entry points to src/netCDF4.egg-info/entry_points.txt writing requirements to src/netCDF4.egg-info/requires.txt writing top-level names to src/netCDF4.egg-info/top_level.txt reading manifest file 'src/netCDF4.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no previously-included files found matching 'examples/data' warning: no previously-included files found matching 'src/netCDF4/_netCDF4.c' adding license file 'LICENSE' writing manifest file 'src/netCDF4.egg-info/SOURCES.txt' copying src/netCDF4/__init__.pyi -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 copying src/netCDF4/_netCDF4.pyi -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 copying src/netCDF4/_netCDF4.pyx -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 copying src/netCDF4/py.typed -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4 creating build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/plugins copying src/netCDF4/plugins/empty.txt -> build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/plugins running build_ext INFO: Disabling color, you really want to install colorlog. Disabling color, you really want to install colorlog. Compiling src/netCDF4/_netCDF4.pyx because it changed. [1/1] Cythonizing src/netCDF4/_netCDF4.pyx building 'netCDF4._netCDF4' extension creating build/temp.openbsd-7.7-octeon-cpython-312/external/nc_complex/src creating build/temp.openbsd-7.7-octeon-cpython-312/src/netCDF4 cc -O2 -pipe -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DNC_COMPLEX_NO_EXPORT=1 -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.12/site-packages/numpy/_core/include -Iinclude -Iexternal/nc_complex/include -Iexternal/nc_complex/include/generated_fallbacks -I/usr/local/include/python3.12 -c external/nc_complex/src/nc_complex.c -o build/temp.openbsd-7.7-octeon-cpython-312/external/nc_complex/src/nc_complex.o cc -O2 -pipe -fPIC -DNPY_NO_DEPRECATED_API=NPY_1_7_API_VERSION -DNC_COMPLEX_NO_EXPORT=1 -I/usr/local/include -I/usr/local/include -I/usr/local/lib/python3.12/site-packages/numpy/_core/include -Iinclude -Iexternal/nc_complex/include -Iexternal/nc_complex/include/generated_fallbacks -I/usr/local/include/python3.12 -c src/netCDF4/_netCDF4.c -o build/temp.openbsd-7.7-octeon-cpython-312/src/netCDF4/_netCDF4.o src/netCDF4/_netCDF4.c:13665:8: warning: passing 'const void *' to parameter of type 'void *' discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers] 13665 | free(__pyx_v_self->memory); | ^~~~~~~~~~~~~~~~~~~~ /usr/include/stdlib.h:109:18: note: passing argument to parameter here 109 | void free(void *); | ^ 1 warning generated. cc -shared -fPIC -L/usr/local/lib/ -O2 -pipe build/temp.openbsd-7.7-octeon-cpython-312/external/nc_complex/src/nc_complex.o build/temp.openbsd-7.7-octeon-cpython-312/src/netCDF4/_netCDF4.o -L/usr/local/lib -L/usr/local/lib -Wl,--enable-new-dtags,-rpath,/usr/local/lib -lnetcdf -o build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/_netCDF4.cpython-312.so installing to build/bdist.openbsd-7.7-octeon/wheel running install running install_lib creating build/bdist.openbsd-7.7-octeon/wheel creating build/bdist.openbsd-7.7-octeon/wheel/netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/__init__.py -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/utils.py -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/__init__.pyi -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/_netCDF4.pyi -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/_netCDF4.pyx -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/py.typed -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 creating build/bdist.openbsd-7.7-octeon/wheel/netCDF4/plugins copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/plugins/empty.txt -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4/plugins copying build/lib.openbsd-7.7-octeon-cpython-312/netCDF4/_netCDF4.cpython-312.so -> build/bdist.openbsd-7.7-octeon/wheel/./netCDF4 running install_egg_info Copying src/netCDF4.egg-info to build/bdist.openbsd-7.7-octeon/wheel/./netCDF4-1.7.2-py3.12.egg-info running install_scripts creating build/bdist.openbsd-7.7-octeon/wheel/netcdf4-1.7.2.dist-info/WHEEL creating '/pobj/py-netcdf4-1.7.2/netcdf4-1.7.2/dist/.tmp-m8olxj2b/netcdf4-1.7.2-cp312-cp312-openbsd_7_7_octeon.whl' and adding 'build/bdist.openbsd-7.7-octeon/wheel' to it adding 'netCDF4/__init__.py' adding 'netCDF4/__init__.pyi' adding 'netCDF4/_netCDF4.cpython-312.so' adding 'netCDF4/_netCDF4.pyi' adding 'netCDF4/_netCDF4.pyx' adding 'netCDF4/py.typed' adding 'netCDF4/utils.py' adding 'netCDF4/plugins/empty.txt' adding 'netcdf4-1.7.2.dist-info/licenses/LICENSE' adding 'netcdf4-1.7.2.dist-info/METADATA' adding 'netcdf4-1.7.2.dist-info/WHEEL' adding 'netcdf4-1.7.2.dist-info/entry_points.txt' adding 'netcdf4-1.7.2.dist-info/top_level.txt' adding 'netcdf4-1.7.2.dist-info/RECORD' removing build/bdist.openbsd-7.7-octeon/wheel Successfully built netcdf4-1.7.2-cp312-cp312-openbsd_7_7_octeon.whl >>> Running fake in math/py-netcdf4 at 1753360099.63 ===> math/py-netcdf4 ===> Faking installation for py3-netcdf4-1.7.2p2 >>> Running package in math/py-netcdf4 at 1753360105.02 ===> math/py-netcdf4 `/pobj/py-netcdf4-1.7.2/fake-mips64/.fake_done' is up to date. ===> Building package for py3-netcdf4-1.7.2p2 Create /ports/packages/mips64/all/py3-netcdf4-1.7.2p2.tgz Fatal: SITES.strap is not defined but referenced by adastrap-mips64-8.4.0-4.tar.xz in DISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-amd64-8.4.0-3.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-arm-4.9.4-0.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-hppa-8.4.0-0.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-i386-8.4.0-2.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-mips64-8.4.0-4.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-powerpc-8.4.0-2.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-sparc64-6.5.0-0.tar.xz in SUPDISTFILES (in lang/gcc/8) *** Error 1 in lang/gcc/8 (/ports/infrastructure/mk/bsd.port.mk:3894 '.BEGIN': @exit 1) *** Problem checking deps in "lang/gcc/8". *** Error 1 in math/hdf5 (/ports/infrastructure/mk/bsd.port.mk:3735 '_recurse-show-run-depends': @for d in shells/bash lang/gcc/8,-libs; do ...) *** Problem checking deps in "math/hdf5". *** Error 1 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:3750 'show-run-depends': @case X${_DEPENDS_FILE} in X) _DEPENDS_FILE=$...) Fatal: SITES.strap is not defined but referenced by adastrap-mips64-8.4.0-4.tar.xz in DISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-amd64-8.4.0-3.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-arm-4.9.4-0.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-hppa-8.4.0-0.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-i386-8.4.0-2.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-mips64-8.4.0-4.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-powerpc-8.4.0-2.tar.xz in SUPDISTFILES (in lang/gcc/8) Fatal: SITES.strap is not defined but referenced by adastrap-sparc64-6.5.0-0.tar.xz in SUPDISTFILES (in lang/gcc/8) *** Error 1 in lang/gcc/8 (/ports/infrastructure/mk/bsd.port.mk:3894 '.BEGIN': @exit 1) Problem with dependency lang/gcc/8,-libs Missing library for netcdf>=0.0 *** Error 1 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:3585 'port-wantlib-args': @case X${_DEPENDS_CACHE} in X) _DEPENDS_CACH...) *** Error 1 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:3576 'wantlib-args': @case X${_DEPENDS_CACHE} in X) _DEPENDS_CACHE=$( ...) *** Error 2 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:2249 '/ports/packages/mips64/all/py3-netcdf4-1.7.2p2.tgz': @trap "cd /p...) *** Error 2 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:2733 '_internal-package': @case X${_DEPENDS_CACHE} in X) _DEPENDS_CACH...) *** Error 2 in math/py-netcdf4 (/ports/infrastructure/mk/bsd.port.mk:2712 'package': @lock=py3-netcdf4-1.7.2p2; export _LOCKS_HELD=" py3-ne...) ===> Exiting math/py-netcdf4 with an error *** Error 1 in /ports (infrastructure/mk/bsd.port.subdir.mk:144 'package': @: ${echo_msg:=echo}; : ${target:=package}; for i in ; do eval...) >>> Ended at 1753360151.69 max_stuck=666.43/depends=47.55/show-prepare-results=31.56/junk=7.69/extract=3.32/patch=1.28/configure=1.32/build=868.52/fake=5.41/package=46.72 Error: job failed with 512 on localhost at 1753360151